CDS

Accession Number TCMCG006C17585
gbkey CDS
Protein Id XP_022559055.1
Location complement(join(35684328..35684580,35684832..35685122,35685215..35686022,35686092..35688249))
Gene LOC106400775
GeneID 106400775
Organism Brassica napus

Protein

Length 1169aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022703334.1
Definition phytochrome B-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12121        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006066        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006714        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006833        [VIEW IN EMBL-EBI]
GO:0006873        [VIEW IN EMBL-EBI]
GO:0006874        [VIEW IN EMBL-EBI]
GO:0006875        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009645        [VIEW IN EMBL-EBI]
GO:0009649        [VIEW IN EMBL-EBI]
GO:0009687        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010029        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010148        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010202        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010244        [VIEW IN EMBL-EBI]
GO:0010374        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010617        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015979        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0017006        [VIEW IN EMBL-EBI]
GO:0017007        [VIEW IN EMBL-EBI]
GO:0017012        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019725        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030003        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031517        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042044        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042752        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043288        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050801        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051480        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055065        [VIEW IN EMBL-EBI]
GO:0055074        [VIEW IN EMBL-EBI]
GO:0055080        [VIEW IN EMBL-EBI]
GO:0055082        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072503        [VIEW IN EMBL-EBI]
GO:0072507        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098771        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1900140        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902644        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990841        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTTCCGGAGTCGGCGGCGGCGGGGGAAGCGGTGGGAGTGGCCGCGGCGGAGGCGGAGAAGAATCCTCGTCAACTCACCGGAGAGAACAAGCTCAATCCTCAGGGACGAAGTCTCTCAGGCCGCAGAACCAACCGCCACAAACGGAATCAATGAGCAAAGCTATTCAGCAGTACACAGTCGACGCCAGACTCCACGCCGTCTTCGAACAATCCGGCGAGTCCGGAAGATCCTTCGACTACTCACAATCCCTCAAAACGACGACGTACGGATCCTCGGTCCCCGAGCAGCAGATCACGGCCTACCTCTCCAGGATCCAGCGCGGCGGCTACATCCAGCCGTTCGGATGCATGATCGCCGTCGACGAGTCCACCTTCACCATCATCGGCTTCAGCGAGAACGCGCGGGAAATGCTCGGCCTCACGCCTCAGTCCGTCCCCAGCCTCGAGAGGCCCGAGATTCTCGCCATGGGAACCGACGTCCGCTCCCTCTTCACCTCCTCCAGCTCGATCCTCCTCGAACGCGCCTTCGCGGCGCGTGAGATCACGCTTCTGAATCCCGTTTGGATCCACTCCAAGTACACTGGCAAGCCGTTTTACGCTATTCTGCACAGGATCGACGTTGGTGTTGTGATCGATTTGGAGCCGGCTAGGAGTGAAGATCCAGCGCTTTCGATCGCCGGAGTGGTTCAGTCTCAGAAGCTTGCCGTTCGCGCTATCTCGCAGTTACAGTCTCTCCCCGGTGGAGATATTAAGCTACTTTGTGACACTGTTGTGGAGAGTGTGAGGGACTTAACTGGATACGACCGTGTGATGGTGTACAAGTTTCACGAAGACGAGCATGGAGAAGTTGTTGCGGAGAGTAGGAGAGAGGATTTAGAGCCTTACATTGGTTTGCATTATCCAGCTACTGATATTCCTCAAGCGTCACGGTTCTTGTTTAAGCAGAATCGTGTGCGTATGATCGTTGATTGCCACGCGACCCCGGTTCTCGTGGTGCAAGACGATAGGCTGACTCAGTCTATGTGCTTGGTTGGCTCTACTTTGAGAGCTCCTCACGGTTGTCACTCTCAGTATATGGCTAACATGGGGTCTATCGCGTCGTTAGCGATGGCGGTTATAATAAACGGGAGTGAAGAAGATGGGAGTAGTGTCGCTGGTGGGAGAAGCTCGATGAGGCTTTGGGGTTTAGTCGTTTGCCATCATACATCTTCTCGATGCATACCGTTTCCTTTGAGGTATGCTTGCGAGTTTTTGATGCAGGCGTTTGGTTTACAGTTGAACATGGAGTTGCAGTTAGCTTTGCAGATGTCGGAGAAACGCGTTTTGAGGACGCAGACGCTGTTGTGCGATATGCTTCTGCGTGACTCGCCTGCTGGGATTGTTACGCAGAGTCCTAGTATCATGGACTTGGTGAAATGTGACGGTGCAGCGTTTCTTTACCACGGGAATTATTACCCGTTGGGTGTTGCTCCGACGGAAGCTCAGATTAAAGACGTTGTGGAGTGGTTGCTTGCGAATCACGCTGATTCAACTGGTTTAAGCACTGATAGTTTAGGGGACGCAGGTTATCCCGGAGCAGCTGCGTTAGGGGATGCTGTCTGCGGTATGGCGGTTGCGTACATCACAAAAAGAGATTTCCTTTTCTGGTTTCGTTCTCACACCGCTAAAGAAATCAAATGGGGAGGCGCTAAGCATCATCCAGAGGACAAAGATGATGGGCAACGGATGCATCCTCGTTCGTCTTTCAAGGCTTTTCTTGAAGTTGTTAAGAGTCGGAGTCAGCCATGGGAAACTGCGGAAATGGATGCGATTCATTCGCTCCAGCTGATTCTAAGGGACTCTTTTAAAGAATCTGAGGCAGCTATGAACTCGAAAACTGCAGATGGTTTTAAAACGCAACTTTGTCGGCAGGCAGGAGAGCAGGGAATTGATGAGTTAGGTGCTGTTGCAAGAGAGATGGTTAGACTCATCGAGACAGCAACTGTGCCTATATTCGCTGTGGATGCTGGAGGATGTATCAATGGATGGAACGCTAAGATTGCAGAGTTGTCCGGTCTCTCGGTTGAAGAAGCTATGGGGAAGTCTCTGGTTTCTGATCTAATATACAAAGAGAATGAAGAAACTGTTGATAAGCTCATTTCTCGTGCGCTCAGAGGGGACGAGGACAGGAATGTGGAGATAAAGCTGAAAACTTTCAGCCCTGAACTACAAGGGAAAGCGGTTTTTGTGGTTGTGAATGCATGTTCGAGCAAGGACTACTCAAACAACATTGTTGGCGTCTGTTTTGTGGGACAGGATGTTACTGGTCAGAAAATCGTAATGGACAAGTTCATCAACATACAAGGAGACTACAAAGCCATCGTCCATAGCCCAAACCCACTGATTCCACCAATCTTTGCGGCGGACGAGAACACGTGCTGCCTGGAGTGGAACACCGCGTTGGAAAAGCTCACTGGTTGGTCTCGCAGTGAAGTGATTGGGAAAATGCTTGTTGGGGAAGTGTTTGGGAGCTATTGCAGGCTAAAGGGTCCTGATGCATTAACCAAGTTCATGATTGTATTGCATAATGCAATCGGTGGCCAAGAGACGGACAAGTTCCCTTTCCCGTTCTTTGACCGCAACGGGAAGTTTGTTCAGGCACTATTGACTGCAAACAAGCGTGTAAGCTTCGACGGGAAAGTTATTGGGGCTTTCTGTTTCTTGCAGATCCCGAGTCCTGAGCTGCAGCAAGCTTTAACAGTTCAACGAAGGCAGGACACAGAGTGTTTCACGAAGGCGAAAGAGCTAGCTTACATTTGTCAGGTGGTAAAGAATCCTTTGAGCGGTTTGCGTTTCACAAACTCGTTGTTGGAAGCTACAGACTTGAACGAAAATCAGAAACAGCTTCTTGAAACAAGTGTTTCTTGCGAGAAACAGATCTCGAGGATTGTCAGTGACATGGATCTTGAAAGAATTGAAGACGGTTCGTTTGAGCTAGTTAGAACGGAGTTTTTACTCGGAAGTGTCATCAACGCGATTGTAAGCCAGGCGATGTTCTTATTAAAGGAGAGAGGCGTTCAGCTGATCCGTGACATTCCTGAAGAGATCAAATCTATACAAGTTTATGGAGACCAGACAAGGATTCAACAGCTCCTAGCTGAGTTTCTGCTGAGTATAATCCGGTATGCACCGTCCCATGAGTGGGTGGAGATCCATATAAGCCATGTTCCGAAGCAAATGGCTGATGGATTCTACGCTATCCGCACAGAATTTAGAATGGTGTGCCCAGGTGAAGGTCTGCCTCCAGAGCTGGTCCGAGACATGTTTCATAGCAGCAGGTGGACGATCCCTGAAGGGTTAGGTCTAAGCGTATGTAGAAGGATTCTAAAGCTCATGAACGGCGAGGTTCAGTACATCAGAGAGTCAGAACGCTCCTATTTCCTCATCATACTCGGGCTCCCCGTTCCTATGAAACGCCCTTTGTCAACCGCTAGCGGCAGCGGCGACATGATGTTGATGATGCCATAA
Protein:  
MVSGVGGGGGSGGSGRGGGGEESSSTHRREQAQSSGTKSLRPQNQPPQTESMSKAIQQYTVDARLHAVFEQSGESGRSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESTFTIIGFSENAREMLGLTPQSVPSLERPEILAMGTDVRSLFTSSSSILLERAFAAREITLLNPVWIHSKYTGKPFYAILHRIDVGVVIDLEPARSEDPALSIAGVVQSQKLAVRAISQLQSLPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESRREDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCHATPVLVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGSEEDGSSVAGGRSSMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGNYYPLGVAPTEAQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKTADGFKTQLCRQAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELSGLSVEEAMGKSLVSDLIYKENEETVDKLISRALRGDEDRNVEIKLKTFSPELQGKAVFVVVNACSSKDYSNNIVGVCFVGQDVTGQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNTALEKLTGWSRSEVIGKMLVGEVFGSYCRLKGPDALTKFMIVLHNAIGGQETDKFPFPFFDRNGKFVQALLTANKRVSFDGKVIGAFCFLQIPSPELQQALTVQRRQDTECFTKAKELAYICQVVKNPLSGLRFTNSLLEATDLNENQKQLLETSVSCEKQISRIVSDMDLERIEDGSFELVRTEFLLGSVINAIVSQAMFLLKERGVQLIRDIPEEIKSIQVYGDQTRIQQLLAEFLLSIIRYAPSHEWVEIHISHVPKQMADGFYAIRTEFRMVCPGEGLPPELVRDMFHSSRWTIPEGLGLSVCRRILKLMNGEVQYIRESERSYFLIILGLPVPMKRPLSTASGSGDMMLMMP